PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn318681
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 296aa    MW: 32903.1 Da    PI: 6.805
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn318681genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.2e-181472148
                     TSSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+d++++ G              +W++Ia +++ gRt++++k++w+++l
       Achn318681 14 KGPWTPEEDKRLADYIQRNGHAswralpklaglnRWAAIATHLP-GRTDNEIKNFWNTHL 72
                     79******************99**********************.************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.7976IPR017930Myb domain
SuperFamilySSF466894.76E-151082IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-221273IPR009057Homeodomain-like
SMARTSM007179.1E-161374IPR001005SANT/Myb domain
PfamPF002491.5E-161472IPR001005SANT/Myb domain
CDDcd001671.22E-131672No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGRSPSLDEI GLKKGPWTPE EDKRLADYIQ RNGHASWRAL PKLAGLNRWA AIATHLPGRT  60
DNEIKNFWNT HLRKKLLQMG IDPVTHRPRT DLSILANLPQ LLAAPNFGNS VNLWDRSLRL  120
QTDGTQLAKI QSLHNILQVL SSTPPPTMEV LHLLGSQTLV DHHQIYESLR IMNSQLGGLG  180
NGHINLAPYP TKIQSNFQNL DHVYQPTHEM DHPMGSSKVL NGDNQFGVTP IAGNSLPALV  240
SVNDQMENKI SLADVSNPST TFEALGELLN DEADDYYWRS DIINQATTPS WPISR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007029608.11e-100Myb domain protein 107
TrEMBLA0A061EYD81e-100A0A061EYD8_THECC; Myb domain protein 107
STRINGVIT_16s0039g01710.t013e-94(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.27e-51myb domain protein 9